STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFC56793.1ABC transporter, permease protein; KEGG: bwe:BcerKBAB4_1203 1.5e-37 ornithine carbamoyltransferase K11070; Psort location: CytoplasmicMembrane, score: 10.00. (268 aa)    
Predicted Functional Partners:
EFC56794.1
ABC transporter, permease protein; KEGG: rca:Rcas_2838 1.7e-13 ornithine carbamoyltransferase K11070; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.998
EFC56796.1
KEGG: pen:PSEEN1241 8.9e-70 ABC transporter, ATP-binding protein K02052.
 
 
 0.998
EFC56797.1
ABC transporter, solute-binding protein; Psort location: Periplasmic, score: 9.44.
 
 
 0.997
potD
Spermidine/putrescine ABC transporter periplasmic substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
  
 0.966
EFC56795.1
TOBE domain protein; KEGG: pen:PSEEN1241 1.7e-27 ABC transporter, ATP-binding protein K02052.
 
    0.944
potF
Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
  
 0.937
potB
Spermidine/putrescine ABC transporter membrane protein; KEGG: rca:Rcas_2838 1.4e-15 ornithine carbamoyltransferase K11070; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.917
potA-2
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  
 0.862
potA
Putrescine/spermidine ABC transporter ATPase protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  
 0.831
ydcW
Aminobutyraldehyde dehydrogenase; Catalyzes the oxidation 4-aminobutanal (gamma- aminobutyraldehyde) to 4-aminobutanoate (gamma-aminobutyrate or GABA). This is the second step in one of two pathways for putrescine degradation, where putrescine is converted into 4-aminobutanoate via 4- aminobutanal. Also functions as a 5-aminopentanal dehydrogenase in a a L-lysine degradation pathway to succinate that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate.
 
    0.781
Your Current Organism:
Enterobacter cancerogenus
NCBI taxonomy Id: 500639
Other names: E. cancerogenus ATCC 35316, Enterobacter cancerogenus ATCC 35316, Enterobacter cancerogenus str. ATCC 35316, Enterobacter cancerogenus strain ATCC 35316
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