STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFC56428.1Phage/conjugal plasmid C-4 type zinc finger protein, TraR family; Psort location: Cytoplasmic, score: 8.96. (71 aa)    
Predicted Functional Partners:
EFC54099.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.814
EFC56962.1
Phage major capsid protein, P2 family.
  
    0.805
EFC54097.1
KEGG: seh:SeHA_C3496 2.8e-117 replication gene A protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.798
EFC54100.1
Hypothetical protein.
  
    0.790
EFC56427.1
Hypothetical protein.
       0.773
EFC56429.1
Hypothetical protein.
       0.773
EFC56953.1
Phage virion morphogenesis protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.687
EFC56960.1
Phage head completion protein (GPL).
  
    0.680
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.678
EFC56963.1
Phage capsid scaffolding protein GpO.
  
    0.674
Your Current Organism:
Enterobacter cancerogenus
NCBI taxonomy Id: 500639
Other names: E. cancerogenus ATCC 35316, Enterobacter cancerogenus ATCC 35316, Enterobacter cancerogenus str. ATCC 35316, Enterobacter cancerogenus strain ATCC 35316
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.