STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFC56466.1MFS transporter, metabolite:H+ symporter (MHS) family protein; KEGG: rcm:A1E_04550 1.4e-12 tdk; thymidylate kinase; Psort location: CytoplasmicMembrane, score: 10.00. (456 aa)    
Predicted Functional Partners:
EFC56467.1
ABC transporter, solute-binding protein; Psort location: Periplasmic, score: 9.44.
 
     0.852
rpmE
Ribosomal protein L31.
   
    0.607
EFC56041.1
Putative sugar-specific permease, SgaT/UlaA; KEGG: sax:USA300HOU_0350 1.3e-134 ascorbate-specific PTS system enzyme IIC K03475; Psort location: CytoplasmicMembrane, score: 10.00.
   
    0.599
nirB
KEGG: ent:Ent638_2322 0. assimilatory nitrite reductase (NAD(P)H) large subunit precursor / assimilatory nitrite reductase (NAD(P)H) small subunit / assimilatory nitrate reductase (NADH) beta subunit K00362; Psort location: Cytoplasmic, score: 9.26; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
  
 0.552
rpmJ
Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
   
    0.495
EFC56465.1
Beta-lactamase; KEGG: kpe:KPK_1541 1.1e-174 beta-lactamase.
       0.430
rpmE-2
Ribosomal protein L31; Binds the 23S rRNA.
   
    0.430
ribE
KEGG: ent:Ent638_1784 1.2e-99 riboflavin synthase subunit alpha K00793; Psort location: Cytoplasmic, score: 8.96.
   
    0.426
Your Current Organism:
Enterobacter cancerogenus
NCBI taxonomy Id: 500639
Other names: E. cancerogenus ATCC 35316, Enterobacter cancerogenus ATCC 35316, Enterobacter cancerogenus str. ATCC 35316, Enterobacter cancerogenus strain ATCC 35316
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.