Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFC54186.1 | EFC56245.1 | ENTCAN_09170 | ENTCAN_07255 | GIY-YIG nuclease superfamily protein; KEGG: eli:ELI_05635 3.2e-06 rRNA methylase; K02533 tRNA/rRNA methyltransferase. | Methyltransferase small domain protein; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC). | 0.704 |
EFC54186.1 | rsmI | ENTCAN_09170 | ENTCAN_09161 | GIY-YIG nuclease superfamily protein; KEGG: eli:ELI_05635 3.2e-06 rRNA methylase; K02533 tRNA/rRNA methyltransferase. | S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.610 |
EFC56245.1 | EFC54186.1 | ENTCAN_07255 | ENTCAN_09170 | Methyltransferase small domain protein; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC). | GIY-YIG nuclease superfamily protein; KEGG: eli:ELI_05635 3.2e-06 rRNA methylase; K02533 tRNA/rRNA methyltransferase. | 0.704 |
EFC56245.1 | rsmI | ENTCAN_07255 | ENTCAN_09161 | Methyltransferase small domain protein; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC). | S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.720 |
EFC56245.1 | srmB | ENTCAN_07255 | ENTCAN_07256 | Methyltransferase small domain protein; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC). | DEAD/DEAH box helicase; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily. | 0.553 |
rsmI | EFC54186.1 | ENTCAN_09161 | ENTCAN_09170 | S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | GIY-YIG nuclease superfamily protein; KEGG: eli:ELI_05635 3.2e-06 rRNA methylase; K02533 tRNA/rRNA methyltransferase. | 0.610 |
rsmI | EFC56245.1 | ENTCAN_09161 | ENTCAN_07255 | S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | Methyltransferase small domain protein; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC). | 0.720 |
srmB | EFC56245.1 | ENTCAN_07256 | ENTCAN_07255 | DEAD/DEAH box helicase; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily. | Methyltransferase small domain protein; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC). | 0.553 |