STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFC56250.1Hypothetical protein. (151 aa)    
Predicted Functional Partners:
EFC56249.1
RNA methyltransferase, TrmH family; KEGG: ent:Ent638_3066 1.4e-96 putative methyltransferase; K03214 RNA methyltransferase, TrmH family.
       0.682
trxA
Thioredoxin; KEGG: ent:Ent638_3067 6.1e-71 thioredoxin 2; K03672 thioredoxin 2; Psort location: Cytoplasmic, score: 9.97; Belongs to the thioredoxin family.
       0.463
Your Current Organism:
Enterobacter cancerogenus
NCBI taxonomy Id: 500639
Other names: E. cancerogenus ATCC 35316, Enterobacter cancerogenus ATCC 35316, Enterobacter cancerogenus str. ATCC 35316, Enterobacter cancerogenus strain ATCC 35316
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.