STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFC55876.1RND transporter, HAE1 family; KEGG: dat:HRM2_00450 3.4e-36 rndA; RndA K07787; Psort location: CytoplasmicMembrane, score: 10.00. (1048 aa)    
Predicted Functional Partners:
acrA
Acriflavine resistance protein A; Psort location: CytoplasmicMembrane, score: 8.02; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.998
EFC54050.1
Type I secretion outer membrane protein, TolC family; KEGG: ccv:CCV52592_0160 2.0e-13 fadD; long-chain-fatty-acid--CoA ligase; Psort location: OuterMembrane, score: 10.00.
 
 0.970
EFC57514.1
Efflux transporter, outer membrane factor lipoprotein, NodT family; KEGG: ccv:CCV52592_0160 5.8e-10 fadD; long-chain-fatty-acid--CoA ligase; Psort location: OuterMembrane, score: 10.00.
 0.956
EFC56867.1
RND transporter, HAE1 family; KEGG: dat:HRM2_00450 7.3e-47 rndA; RndA K07787; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
0.907
EFC54333.1
Efflux transporter, RND family, MFP subunit; KEGG: cco:CCC13826_0687 0.0014 selB; selenocysteine-specific elongation factor SelB; Psort location: CytoplasmicMembrane, score: 8.02; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.874
EFC55387.1
Efflux transporter, RND family, MFP subunit; Psort location: CytoplasmicMembrane, score: 8.02; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.854
mdtA
Efflux transporter, RND family, MFP subunit; KEGG: cco:CCC13826_0687 1.3e-05 selB; selenocysteine-specific elongation factor SelB; Psort location: CytoplasmicMembrane, score: 8.02; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.743
EFC55662.1
Efflux transporter, outer membrane factor lipoprotein, NodT family; Psort location: OuterMembrane, score: 10.00.
 
 0.715
EFC55674.1
Efflux transporter, outer membrane factor lipoprotein, NodT family; Psort location: OuterMembrane, score: 10.00.
 
 0.688
yajC
Preprotein translocase, YajC subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.
    
 
 0.660
Your Current Organism:
Enterobacter cancerogenus
NCBI taxonomy Id: 500639
Other names: E. cancerogenus ATCC 35316, Enterobacter cancerogenus ATCC 35316, Enterobacter cancerogenus str. ATCC 35316, Enterobacter cancerogenus strain ATCC 35316
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.