STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFC55402.1Glycyl-radical enzyme activating protein family protein; KEGG: pca:Pcar_0943 2.8e-66 pyruvate-formate lyase-activating enzyme; K04069 pyruvate formate lyase activating enzyme; Psort location: Cytoplasmic, score: 9.97. (319 aa)    
Predicted Functional Partners:
cutC-2
Putative formate C-acetyltransferase; Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde. Belongs to the glycyl radical enzyme (GRE) family. CutC subfamily.
 
  
 0.974
EFC57912.1
KEGG: ent:Ent638_1317 0. pyruvate formate-lyase K00656; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.889
pflB-2
KEGG: ent:Ent638_3561 0. keto acid formate lyase K00656; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.879
pflB
Formate C-acetyltransferase; KEGG: cko:CKO_02168 0. hypothetical protein; K00656 formate C-acetyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.878
EFC56985.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: sek:SSPA1048 0. alcohol dehydrogenase; K00001 alcohol dehydrogenase K04072; Psort location: Cytoplasmic, score: 9.26; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
 
  
 0.807
EFC55401.1
Hypothetical protein.
       0.773
grcA
Autonomous glycyl radical cofactor; Acts as a radical domain for damaged PFL and possibly other radical proteins.
  
     0.767
EFC55404.1
Multidrug resistance protein, SMR family; KEGG: cco:CCC13826_0782 0.0065 methionyl-tRNA formyltransferase K11741; Psort location: CytoplasmicMembrane, score: 10.00.
       0.762
YjjW
Hypothetical protein; KEGG: son:SO_2408 3.3e-47 radical activating enzyme; K04069 pyruvate formate lyase activating enzyme; Psort location: Cytoplasmic, score: 9.26.
  
     0.754
nirB
KEGG: ent:Ent638_2322 0. assimilatory nitrite reductase (NAD(P)H) large subunit precursor / assimilatory nitrite reductase (NAD(P)H) small subunit / assimilatory nitrate reductase (NADH) beta subunit K00362; Psort location: Cytoplasmic, score: 9.26; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.752
Your Current Organism:
Enterobacter cancerogenus
NCBI taxonomy Id: 500639
Other names: E. cancerogenus ATCC 35316, Enterobacter cancerogenus ATCC 35316, Enterobacter cancerogenus str. ATCC 35316, Enterobacter cancerogenus strain ATCC 35316
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