STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFC53940.1Twitching motility protein; KEGG: pmj:P9211_08241 5.8e-26 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02652; Psort location: Cytoplasmic, score: 9.26. (326 aa)    
Predicted Functional Partners:
EFC57664.1
Bacterial type II secretion system domain protein F; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.954
gspF
General secretion pathway protein F; Psort location: CytoplasmicMembrane, score: 9.46.
 
 
 0.954
gspG
General secretion pathway protein G.
 
 
 0.871
EFC57978.1
Bacterial peptidase A24, N-terminal domain protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.859
pilQ
Type IV pilus secretin PilQ; KEGG: bha:BH3792 0.0046 ctrA; CTP synthetase K01937; Psort location: OuterMembrane, score: 10.00.
 
 
 
 0.836
gspL
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
 
 0.785
gspI
General secretion pathway protein I.
 
 
 0.733
EFC57972.1
Prepilin-type cleavage/methylation N-terminal domain protein.
 
 
 0.729
EFC54733.1
Fimbrial assembly protein PilN.
  
 
 0.724
EFC58042.1
DNA internalization competence protein ComEC/Rec2-like protein; KEGG: xac:XAC1087 0.0030 gloB; hydroxyacylglutathione hydrolase; K01069 hydroxyacylglutathione hydrolase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.666
Your Current Organism:
Enterobacter cancerogenus
NCBI taxonomy Id: 500639
Other names: E. cancerogenus ATCC 35316, Enterobacter cancerogenus ATCC 35316, Enterobacter cancerogenus str. ATCC 35316, Enterobacter cancerogenus strain ATCC 35316
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.