STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TamAOuter membrane protein, OMP85 family; Psort location: OuterMembrane, score: 10.00. (450 aa)    
Predicted Functional Partners:
TamB
KEGG: bmf:BAB1_0046 1.4e-17 hypothetical protein K09800; Psort location: OuterMembrane, score: 9.49.
 
 
 0.993
EFC53725.1
AIG2-like family protein.
 
   
 0.835
EFC57465.1
Hypothetical protein.
  
 
 0.805
lptD
Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
  
   
 0.561
lptF
Lipopolysaccharide export system permease protein LptF; KEGG: hiq:CGSHiGG_02270 5.7e-91 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K07091; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.550
EFC53865.1
Hypothetical protein.
 
    
0.494
EFC54065.1
KEGG: vfi:VF_2241 9.5e-34 htrG; signal transduction protein K07184.
  
     0.475
EFC53803.1
Transporter, small conductance mechanosensitive ion channel MscS family protein; KEGG: mla:Mlab_1701 2.1e-14 phosphoglycerate mutase K01834; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.461
EFC54636.1
Cytochrome c assembly protein; KEGG: sab:SAB1531c 0.00035 membrane uroporphyrinogen III methylase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.410
EFC54272.1
Hypothetical protein; KEGG: eck:EC55989_3646 8.2e-60 yhcB; putative cytochrome d ubiquinol oxidase subunit III K09908.
  
     0.410
Your Current Organism:
Enterobacter cancerogenus
NCBI taxonomy Id: 500639
Other names: E. cancerogenus ATCC 35316, Enterobacter cancerogenus ATCC 35316, Enterobacter cancerogenus str. ATCC 35316, Enterobacter cancerogenus strain ATCC 35316
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.