STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3F2XZ95Uncharacterized protein. (567 aa)    
Predicted Functional Partners:
BN3033_LOCUS8
Uncharacterized protein.
    
 0.844
A0A3F2Y4P1
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.783
A0A3F2Y002
Spindle pole body component.
    
 0.753
A0A3F2Y228
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.709
A0A3F2Y6K5
Nucleoside diphosphate kinase.
    
 0.704
A0A3F2XXM2
Histone domain-containing protein.
    
 0.690
A0A3F2XYU3
Uncharacterized protein.
    
 0.690
A0A3F2Y0J1
Histone H3; Belongs to the histone H3 family.
    
 0.690
A0A3F2Y0V9
Histone domain-containing protein.
    
 0.690
A0A3F2Y001
Histone H2B; Belongs to the histone H2B family.
    
 0.667
Your Current Organism:
Brettanomyces bruxellensis
NCBI taxonomy Id: 5007
Other names: ATCC 36234, B. bruxellensis, Brettanomyces custersii, CBS 72, CBS 74, CCRC 21414, CCRC:21414, DBVPG 6706, Dekkera bruxellensis, Dekkera intermedia, NCYC 823, NRRL Y-12961
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.