STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3F2Y0U3Uncharacterized protein. (680 aa)    
Predicted Functional Partners:
A0A3F2Y8J2
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
  0.944
BN3033_LOCUS94
DNA helicase; Belongs to the MCM family.
   
    0.869
A0A3F2Y560
RRM domain-containing protein.
    
 0.766
A0A3F2Y158
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.749
A0A3F2Y3Y7
Sm domain-containing protein.
   
 0.746
A0A3F2XZ31
Sm domain-containing protein.
   
 0.745
A0A3F2Y6L4
RRM domain-containing protein.
    
 0.744
A0A3F2Y2H9
Sm domain-containing protein.
   
 0.739
A0A3F2Y220
MIF4G domain-containing protein.
    
 0.733
A0A3F2Y859
Matrin-type domain-containing protein.
    
 0.733
Your Current Organism:
Brettanomyces bruxellensis
NCBI taxonomy Id: 5007
Other names: ATCC 36234, B. bruxellensis, Brettanomyces custersii, CBS 72, CBS 74, CCRC 21414, CCRC:21414, DBVPG 6706, Dekkera bruxellensis, Dekkera intermedia, NCYC 823, NRRL Y-12961
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.