STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLP1mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (487 aa)    
Predicted Functional Partners:
A0A3F2Y7T2
CID domain-containing protein.
    
 0.999
A0A3F2Y197
Uncharacterized protein.
   
 0.976
A0A3F2XYM3
Uncharacterized protein.
    
 
 0.955
A0A3F2YAC3
Fip1 domain-containing protein.
    
 0.952
A0A3F2XZU2
Suf domain-containing protein.
    
 0.941
A0A3F2Y9X0
Uncharacterized protein.
    
 0.922
A0A3F2Y456
Uncharacterized protein.
   
 0.900
A0A3F2Y1V6
RRM domain-containing protein.
   
 0.896
A0A3F2Y7S6
CPSF_A domain-containing protein.
   
 0.887
A0A3F2XWS1
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.885
Your Current Organism:
Brettanomyces bruxellensis
NCBI taxonomy Id: 5007
Other names: ATCC 36234, B. bruxellensis, Brettanomyces custersii, CBS 72, CBS 74, CCRC 21414, CCRC:21414, DBVPG 6706, Dekkera bruxellensis, Dekkera intermedia, NCYC 823, NRRL Y-12961
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.