Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
OOC53690.1Cytosine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)    
Predicted Functional Partners:
OOC57071.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.897
OOC55444.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.789
OOC57285.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.776
NOSIN_03135
N-hydroxyarylamine O-acetyltransferase; Frameshifted; internal stop; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.773
OOC54119.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.769
OOC53429.1
trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.475
OOC53882.1
Aminodeoxychorismate synthase, component I; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.475
OOC54567.1
HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.472
OOC53691.1
Putrescine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.440
OOC55600.1
HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.437
Your Current Organism:
Nocardiopsis sinuspersici
NCBI taxonomy Id: 501010
Other names: CCUG 57624, DSM 45277, N. sinuspersici, Nocardiopsis sinuspersici Hamedi et al. 2010, Nocardiopsis sp. HM6, UTMC 00102, strain HM6
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