ku protein (Nocardiopsis sinuspersici) - STRING interaction network

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ku

Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. (327 aa)

Predicted Functional Partners:

OOC52647.1

0.925

OOC53763.1

0.505

OOC53765.1

0.473

OOC55758.1

0.463

OOC54347.1

0.446

Your Current Organism:

Nocardiopsis sinuspersici

NCBI taxonomy Id: 501010
Other names: CCUG 57624, DSM 45277, N. sinuspersici, Nocardiopsis sinuspersici Hamedi et al. 2010, Nocardiopsis sp. HM6, UTMC 00102, strain HM6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OOC52647.1	OOC54347.1	NOSIN_01370	NOSIN_11475	DNA polymerase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.400
OOC52647.1	OOC55758.1	NOSIN_01370	NOSIN_19595	DNA polymerase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.423
OOC52647.1	ku	NOSIN_01370	NOSIN_08085	DNA polymerase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.925
OOC53763.1	ku	NOSIN_08080	NOSIN_08085	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.505
OOC53765.1	ku	NOSIN_08090	NOSIN_08085	Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.473
OOC54347.1	OOC52647.1	NOSIN_11475	NOSIN_01370	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.400
OOC54347.1	ku	NOSIN_11475	NOSIN_08085	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.446
OOC55758.1	OOC52647.1	NOSIN_19595	NOSIN_01370	DNA topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.423
OOC55758.1	ku	NOSIN_19595	NOSIN_08085	DNA topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.463
ku	OOC52647.1	NOSIN_08085	NOSIN_01370	Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	DNA polymerase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
ku	OOC53763.1	NOSIN_08085	NOSIN_08080	Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.505
ku	OOC53765.1	NOSIN_08085	NOSIN_08090	Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.473
ku	OOC54347.1	NOSIN_08085	NOSIN_11475	Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.446
ku	OOC55758.1	NOSIN_08085	NOSIN_19595	Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	DNA topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.463

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