Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OOC54031.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)    
Predicted Functional Partners:
OOC53714.1
Alpha-glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.683
OOC52637.1
Maltose alpha-D-glucosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.641
glgE
Alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
    
  0.641
OOC52987.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.641
OOC53190.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.641
OOC54522.1
Glucohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.641
OOC55658.1
Alpha-1,6-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.
    
  0.641
OOC56563.1
Glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.641
OOC56849.1
Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.557
NOSIN_08395
Methyltransferase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.533
Your Current Organism:
Nocardiopsis sinuspersici
NCBI taxonomy Id: 501010
Other names: CCUG 57624, DSM 45277, N. sinuspersici, Nocardiopsis sinuspersici Hamedi et al. 2010, Nocardiopsis sp. HM6, UTMC 00102, strain HM6
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