STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOC56695.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)    
Predicted Functional Partners:
OOC56696.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.669
OOC56694.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.652
OOC56693.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.650
OOC56692.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.645
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.639
OOC56691.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.601
OOC55087.1
Cell wall assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.582
OOC55553.1
Silent information regulator protein Sir2; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.582
OOC56364.1
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
    
  0.548
OOC53083.1
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.518
Your Current Organism:
Nocardiopsis sinuspersici
NCBI taxonomy Id: 501010
Other names: CCUG 57624, DSM 45277, N. sinuspersici, Nocardiopsis sinuspersici Hamedi et al. 2010, Nocardiopsis sp. HM6, UTMC 00102, strain HM6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.