Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH39394.1 | SEH39406.1 | RTCCBAU85039_0121 | RTCCBAU85039_0122 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Hypothetical protein. | 0.763 |
SEH39394.1 | SEH39417.1 | RTCCBAU85039_0121 | RTCCBAU85039_0123 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Heme biosynthesis-associated TPR protein. | 0.815 |
SEH39394.1 | SEH39432.1 | RTCCBAU85039_0121 | RTCCBAU85039_0124 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Tellurite resistance protein. | 0.625 |
SEH39394.1 | SEH39446.1 | RTCCBAU85039_0121 | RTCCBAU85039_0125 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Glutamine amidotransferase. | 0.571 |
SEH39394.1 | SEH39460.1 | RTCCBAU85039_0121 | RTCCBAU85039_0126 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Hypothetical protein. | 0.408 |
SEH39394.1 | SEH39771.1 | RTCCBAU85039_0121 | RTCCBAU85039_0147 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Invasion protein B, involved in pathogenesis. | 0.447 |
SEH39394.1 | gcp_1 | RTCCBAU85039_0121 | RTCCBAU85039_0119 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | t(6)A37 threonylcarbamoyladenosine biosynthesis protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.681 |
SEH39394.1 | hemC | RTCCBAU85039_0121 | RTCCBAU85039_0120 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.992 |
SEH39406.1 | SEH39394.1 | RTCCBAU85039_0122 | RTCCBAU85039_0121 | Hypothetical protein. | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.763 |
SEH39406.1 | SEH39417.1 | RTCCBAU85039_0122 | RTCCBAU85039_0123 | Hypothetical protein. | Heme biosynthesis-associated TPR protein. | 0.940 |
SEH39406.1 | SEH39432.1 | RTCCBAU85039_0122 | RTCCBAU85039_0124 | Hypothetical protein. | Tellurite resistance protein. | 0.820 |
SEH39406.1 | SEH39446.1 | RTCCBAU85039_0122 | RTCCBAU85039_0125 | Hypothetical protein. | Glutamine amidotransferase. | 0.763 |
SEH39406.1 | SEH39460.1 | RTCCBAU85039_0122 | RTCCBAU85039_0126 | Hypothetical protein. | Hypothetical protein. | 0.455 |
SEH39406.1 | SEH39771.1 | RTCCBAU85039_0122 | RTCCBAU85039_0147 | Hypothetical protein. | Invasion protein B, involved in pathogenesis. | 0.625 |
SEH39406.1 | gcp_1 | RTCCBAU85039_0122 | RTCCBAU85039_0119 | Hypothetical protein. | t(6)A37 threonylcarbamoyladenosine biosynthesis protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.534 |
SEH39406.1 | hemC | RTCCBAU85039_0122 | RTCCBAU85039_0120 | Hypothetical protein. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.864 |
SEH39417.1 | SEH39394.1 | RTCCBAU85039_0123 | RTCCBAU85039_0121 | Heme biosynthesis-associated TPR protein. | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.815 |
SEH39417.1 | SEH39406.1 | RTCCBAU85039_0123 | RTCCBAU85039_0122 | Heme biosynthesis-associated TPR protein. | Hypothetical protein. | 0.940 |
SEH39417.1 | SEH39432.1 | RTCCBAU85039_0123 | RTCCBAU85039_0124 | Heme biosynthesis-associated TPR protein. | Tellurite resistance protein. | 0.836 |
SEH39417.1 | SEH39446.1 | RTCCBAU85039_0123 | RTCCBAU85039_0125 | Heme biosynthesis-associated TPR protein. | Glutamine amidotransferase. | 0.802 |
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