Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
baiA1 | fadB_1 | RTCCBAU85039_0141 | RTCCBAU85039_1877 | Bile acid 7-dehydroxylase 1/3; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Fatty acid oxidation complex subunit alpha. | 0.688 |
baiA1 | fadJ | RTCCBAU85039_0141 | RTCCBAU85039_4960 | Bile acid 7-dehydroxylase 1/3; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Fatty acid oxidation complex subunit alpha. | 0.688 |
baiA1 | gcvP | RTCCBAU85039_0141 | RTCCBAU85039_2893 | Bile acid 7-dehydroxylase 1/3; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.732 |
baiA1 | gcvT_2 | RTCCBAU85039_0141 | RTCCBAU85039_2474 | Bile acid 7-dehydroxylase 1/3; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Aminomethyltransferase. | 0.664 |
baiA1 | gcvT_5 | RTCCBAU85039_0141 | RTCCBAU85039_6519 | Bile acid 7-dehydroxylase 1/3; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Aminomethyltransferase. | 0.664 |
baiA1 | gltB_1 | RTCCBAU85039_0141 | RTCCBAU85039_5470 | Bile acid 7-dehydroxylase 1/3; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Ferredoxin-dependent glutamate synthase 1. | 0.741 |
baiA1 | hmp_2 | RTCCBAU85039_0141 | RTCCBAU85039_3174 | Bile acid 7-dehydroxylase 1/3; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Nitric oxide dioxygenase. | 0.658 |
baiA1 | lgrB_1 | RTCCBAU85039_0141 | RTCCBAU85039_6650 | Bile acid 7-dehydroxylase 1/3; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Linear gramicidin synthase subunit B. | 0.768 |
baiA1 | lgrD_1 | RTCCBAU85039_0141 | RTCCBAU85039_6649 | Bile acid 7-dehydroxylase 1/3; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Linear gramicidin synthase subunit D. | 0.951 |
baiA1 | thcD_2 | RTCCBAU85039_0141 | RTCCBAU85039_5403 | Bile acid 7-dehydroxylase 1/3; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Rhodocoxin reductase. | 0.737 |
fadB_1 | baiA1 | RTCCBAU85039_1877 | RTCCBAU85039_0141 | Fatty acid oxidation complex subunit alpha. | Bile acid 7-dehydroxylase 1/3; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.688 |
fadB_1 | fadJ | RTCCBAU85039_1877 | RTCCBAU85039_4960 | Fatty acid oxidation complex subunit alpha. | Fatty acid oxidation complex subunit alpha. | 0.918 |
fadB_1 | gcvP | RTCCBAU85039_1877 | RTCCBAU85039_2893 | Fatty acid oxidation complex subunit alpha. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.422 |
fadB_1 | gcvT_2 | RTCCBAU85039_1877 | RTCCBAU85039_2474 | Fatty acid oxidation complex subunit alpha. | Aminomethyltransferase. | 0.587 |
fadB_1 | gcvT_5 | RTCCBAU85039_1877 | RTCCBAU85039_6519 | Fatty acid oxidation complex subunit alpha. | Aminomethyltransferase. | 0.587 |
fadB_1 | gltB_1 | RTCCBAU85039_1877 | RTCCBAU85039_5470 | Fatty acid oxidation complex subunit alpha. | Ferredoxin-dependent glutamate synthase 1. | 0.410 |
fadB_1 | hmp_2 | RTCCBAU85039_1877 | RTCCBAU85039_3174 | Fatty acid oxidation complex subunit alpha. | Nitric oxide dioxygenase. | 0.836 |
fadB_1 | lgrB_1 | RTCCBAU85039_1877 | RTCCBAU85039_6650 | Fatty acid oxidation complex subunit alpha. | Linear gramicidin synthase subunit B. | 0.816 |
fadB_1 | lgrD_1 | RTCCBAU85039_1877 | RTCCBAU85039_6649 | Fatty acid oxidation complex subunit alpha. | Linear gramicidin synthase subunit D. | 0.985 |
fadJ | baiA1 | RTCCBAU85039_4960 | RTCCBAU85039_0141 | Fatty acid oxidation complex subunit alpha. | Bile acid 7-dehydroxylase 1/3; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.688 |
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