STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH52595.1Glyoxalase-like domain protein. (178 aa)    
Predicted Functional Partners:
scpA_2
Methylmalonyl-CoA mutase.
    
 0.796
blh_1
Beta-lactamase hydrolase-like protein.
     
 0.678
SEI22527.1
Hypothetical protein.
  
     0.538
sdhC
Succinate dehydrogenase cytochrome b556 subunit.
   
    0.465
hemR
Hemin receptor precursor.
  
     0.456
yedQ_1
Putative diguanylate cyclase YedQ.
       0.450
lgrD_1
Linear gramicidin synthase subunit D.
  
 0.425
Your Current Organism:
Rhizobium tibeticum
NCBI taxonomy Id: 501024
Other names: CCBAU 85039, CGMCC 1.7071, LMG 24453, LMG:24453, R. tibeticum, Rhizobium sp. CCBAU 85039, Rhizobium tibeticum Hou et al. 2009
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.