Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH60294.1 | SEH60309.1 | RTCCBAU85039_1353 | RTCCBAU85039_1354 | Hypothetical protein. | Putative protein tyrosine phosphatase. | 0.718 |
SEH60294.1 | SEH60323.1 | RTCCBAU85039_1353 | RTCCBAU85039_1355 | Hypothetical protein. | Hypothetical protein. | 0.718 |
SEH60294.1 | SEH60338.1 | RTCCBAU85039_1353 | RTCCBAU85039_1356 | Hypothetical protein. | Putative global regulator; Belongs to the GcvT family. | 0.718 |
SEH60309.1 | SEH60294.1 | RTCCBAU85039_1354 | RTCCBAU85039_1353 | Putative protein tyrosine phosphatase. | Hypothetical protein. | 0.718 |
SEH60309.1 | SEH60323.1 | RTCCBAU85039_1354 | RTCCBAU85039_1355 | Putative protein tyrosine phosphatase. | Hypothetical protein. | 0.825 |
SEH60309.1 | SEH60338.1 | RTCCBAU85039_1354 | RTCCBAU85039_1356 | Putative protein tyrosine phosphatase. | Putative global regulator; Belongs to the GcvT family. | 0.800 |
SEH60323.1 | SEH60294.1 | RTCCBAU85039_1355 | RTCCBAU85039_1353 | Hypothetical protein. | Hypothetical protein. | 0.718 |
SEH60323.1 | SEH60309.1 | RTCCBAU85039_1355 | RTCCBAU85039_1354 | Hypothetical protein. | Putative protein tyrosine phosphatase. | 0.825 |
SEH60323.1 | SEH60338.1 | RTCCBAU85039_1355 | RTCCBAU85039_1356 | Hypothetical protein. | Putative global regulator; Belongs to the GcvT family. | 0.805 |
SEH60323.1 | SEI13359.1 | RTCCBAU85039_1355 | RTCCBAU85039_4927 | Hypothetical protein. | Hypothetical protein. | 0.737 |
SEH60323.1 | dcd | RTCCBAU85039_1355 | RTCCBAU85039_0871 | Hypothetical protein. | Deoxycytidine triphosphate deaminase. | 0.819 |
SEH60323.1 | guaB | RTCCBAU85039_1355 | RTCCBAU85039_0663 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.754 |
SEH60323.1 | hisS | RTCCBAU85039_1355 | RTCCBAU85039_0628 | Hypothetical protein. | Histidine-tRNA ligase. | 0.717 |
SEH60323.1 | punA | RTCCBAU85039_1355 | RTCCBAU85039_2448 | Hypothetical protein. | Purine nucleoside phosphorylase 1; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.728 |
SEH60323.1 | surE | RTCCBAU85039_1355 | RTCCBAU85039_3188 | Hypothetical protein. | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.731 |
SEH60323.1 | yutF_1 | RTCCBAU85039_1355 | RTCCBAU85039_0619 | Hypothetical protein. | Putative hydrolase YutF. | 0.702 |
SEH60338.1 | SEH60294.1 | RTCCBAU85039_1356 | RTCCBAU85039_1353 | Putative global regulator; Belongs to the GcvT family. | Hypothetical protein. | 0.718 |
SEH60338.1 | SEH60309.1 | RTCCBAU85039_1356 | RTCCBAU85039_1354 | Putative global regulator; Belongs to the GcvT family. | Putative protein tyrosine phosphatase. | 0.800 |
SEH60338.1 | SEH60323.1 | RTCCBAU85039_1356 | RTCCBAU85039_1355 | Putative global regulator; Belongs to the GcvT family. | Hypothetical protein. | 0.805 |
SEI13359.1 | SEH60323.1 | RTCCBAU85039_4927 | RTCCBAU85039_1355 | Hypothetical protein. | Hypothetical protein. | 0.737 |
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