node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH61921.1 | SEI18695.1 | RTCCBAU85039_1440 | RTCCBAU85039_5971 | DnaA regulatory inactivator Hda; Belongs to the DnaA family. | Replicative DNA helicase. | 0.861 |
SEH61921.1 | dnaA | RTCCBAU85039_1440 | RTCCBAU85039_1026 | DnaA regulatory inactivator Hda; Belongs to the DnaA family. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.800 |
SEH61921.1 | dnaC_1 | RTCCBAU85039_1440 | RTCCBAU85039_1388 | DnaA regulatory inactivator Hda; Belongs to the DnaA family. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.889 |
SEH61921.1 | dnaN | RTCCBAU85039_1440 | RTCCBAU85039_1077 | DnaA regulatory inactivator Hda; Belongs to the DnaA family. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.998 |
SEH61921.1 | lgrD_1 | RTCCBAU85039_1440 | RTCCBAU85039_6649 | DnaA regulatory inactivator Hda; Belongs to the DnaA family. | Linear gramicidin synthase subunit D. | 0.800 |
SEH61921.1 | recF | RTCCBAU85039_1440 | RTCCBAU85039_2281 | DnaA regulatory inactivator Hda; Belongs to the DnaA family. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.835 |
SEH61921.1 | rpmE | RTCCBAU85039_1440 | RTCCBAU85039_4041 | DnaA regulatory inactivator Hda; Belongs to the DnaA family. | 50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily. | 0.840 |
SEH61921.1 | rpmJ | RTCCBAU85039_1440 | RTCCBAU85039_4020 | DnaA regulatory inactivator Hda; Belongs to the DnaA family. | Hypothetical protein; Belongs to the bacterial ribosomal protein bL36 family. | 0.855 |
SEH61921.1 | thcD_2 | RTCCBAU85039_1440 | RTCCBAU85039_5403 | DnaA regulatory inactivator Hda; Belongs to the DnaA family. | Rhodocoxin reductase. | 0.833 |
SEH61921.1 | tqsA_2 | RTCCBAU85039_1440 | RTCCBAU85039_1439 | DnaA regulatory inactivator Hda; Belongs to the DnaA family. | Transport of quorum-sensing signal protein. | 0.942 |
SEI18695.1 | SEH61921.1 | RTCCBAU85039_5971 | RTCCBAU85039_1440 | Replicative DNA helicase. | DnaA regulatory inactivator Hda; Belongs to the DnaA family. | 0.861 |
SEI18695.1 | dnaA | RTCCBAU85039_5971 | RTCCBAU85039_1026 | Replicative DNA helicase. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.861 |
dnaA | SEH61921.1 | RTCCBAU85039_1026 | RTCCBAU85039_1440 | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | DnaA regulatory inactivator Hda; Belongs to the DnaA family. | 0.800 |
dnaA | SEI18695.1 | RTCCBAU85039_1026 | RTCCBAU85039_5971 | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | Replicative DNA helicase. | 0.861 |
dnaA | dnaC_1 | RTCCBAU85039_1026 | RTCCBAU85039_1388 | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.994 |
dnaA | dnaN | RTCCBAU85039_1026 | RTCCBAU85039_1077 | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.998 |
dnaA | lgrD_1 | RTCCBAU85039_1026 | RTCCBAU85039_6649 | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | Linear gramicidin synthase subunit D. | 0.800 |
dnaA | recF | RTCCBAU85039_1026 | RTCCBAU85039_2281 | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.884 |
dnaC_1 | SEH61921.1 | RTCCBAU85039_1388 | RTCCBAU85039_1440 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | DnaA regulatory inactivator Hda; Belongs to the DnaA family. | 0.889 |
dnaC_1 | dnaA | RTCCBAU85039_1388 | RTCCBAU85039_1026 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.994 |