Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
echA8_1 | fadB_1 | RTCCBAU85039_1028 | RTCCBAU85039_1877 | Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family. | Fatty acid oxidation complex subunit alpha. | 0.786 |
echA8_1 | fadB_3 | RTCCBAU85039_1028 | RTCCBAU85039_5751 | Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family. | Putative enoyl-CoA hydratase. | 0.737 |
echA8_1 | fadJ | RTCCBAU85039_1028 | RTCCBAU85039_4960 | Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family. | Fatty acid oxidation complex subunit alpha. | 0.786 |
echA8_1 | lgrD_1 | RTCCBAU85039_1028 | RTCCBAU85039_6649 | Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family. | Linear gramicidin synthase subunit D. | 0.967 |
echA8_1 | menB | RTCCBAU85039_1028 | RTCCBAU85039_0330 | Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family. | 1,4-Dihydroxy-2-naphthoyl-CoA synthase. | 0.681 |
echA8_1 | mmgB | RTCCBAU85039_1028 | RTCCBAU85039_6898 | Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family. | Putative 3-hydroxybutyryl-CoA dehydrogenase. | 0.993 |
echA8_1 | paaG | RTCCBAU85039_1028 | RTCCBAU85039_1875 | Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family. | 1,2-epoxyphenylacetyl-CoA isomerase. | 0.949 |
echA8_1 | paaJ | RTCCBAU85039_1028 | RTCCBAU85039_1853 | Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-oxoadipyl-CoA/3-oxo-5, 6-dehydrosuberyl-CoAthiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.872 |
echA8_1 | paaZ | RTCCBAU85039_1028 | RTCCBAU85039_1860 | Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family. | Bifunctional protein PaaZ. | 0.797 |
fadB_1 | echA8_1 | RTCCBAU85039_1877 | RTCCBAU85039_1028 | Fatty acid oxidation complex subunit alpha. | Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.786 |
fadB_1 | fadB_2 | RTCCBAU85039_1877 | RTCCBAU85039_5231 | Fatty acid oxidation complex subunit alpha. | Putative enoyl-CoA hydratase. | 0.557 |
fadB_1 | fadB_3 | RTCCBAU85039_1877 | RTCCBAU85039_5751 | Fatty acid oxidation complex subunit alpha. | Putative enoyl-CoA hydratase. | 0.776 |
fadB_1 | fadJ | RTCCBAU85039_1877 | RTCCBAU85039_4960 | Fatty acid oxidation complex subunit alpha. | Fatty acid oxidation complex subunit alpha. | 0.918 |
fadB_1 | lgrD_1 | RTCCBAU85039_1877 | RTCCBAU85039_6649 | Fatty acid oxidation complex subunit alpha. | Linear gramicidin synthase subunit D. | 0.985 |
fadB_1 | menB | RTCCBAU85039_1877 | RTCCBAU85039_0330 | Fatty acid oxidation complex subunit alpha. | 1,4-Dihydroxy-2-naphthoyl-CoA synthase. | 0.780 |
fadB_1 | mmgB | RTCCBAU85039_1877 | RTCCBAU85039_6898 | Fatty acid oxidation complex subunit alpha. | Putative 3-hydroxybutyryl-CoA dehydrogenase. | 0.780 |
fadB_1 | paaG | RTCCBAU85039_1877 | RTCCBAU85039_1875 | Fatty acid oxidation complex subunit alpha. | 1,2-epoxyphenylacetyl-CoA isomerase. | 0.908 |
fadB_1 | paaJ | RTCCBAU85039_1877 | RTCCBAU85039_1853 | Fatty acid oxidation complex subunit alpha. | 3-oxoadipyl-CoA/3-oxo-5, 6-dehydrosuberyl-CoAthiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.999 |
fadB_1 | paaZ | RTCCBAU85039_1877 | RTCCBAU85039_1860 | Fatty acid oxidation complex subunit alpha. | Bifunctional protein PaaZ. | 0.947 |
fadB_2 | fadB_1 | RTCCBAU85039_5231 | RTCCBAU85039_1877 | Putative enoyl-CoA hydratase. | Fatty acid oxidation complex subunit alpha. | 0.557 |
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