STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ropA_3Outer membrane protein IIIA precursor; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. (343 aa)    
Predicted Functional Partners:
SEH61673.1
Opacity protein antigens.
  
 
 0.806
SEH96471.1
Apolipoprotein A1/A4/E domain protein.
  
     0.774
SEI07487.1
Putative assembly protein.
  
     0.773
SEH75548.1
Hypothetical protein.
  
     0.772
SEH37932.1
Hypothetical protein.
  
     0.771
SEH62222.1
Hypothetical protein.
  
     0.770
SEI05599.1
Hypothetical protein.
  
     0.769
SEH96235.1
Hypothetical protein.
  
     0.767
SEH53600.1
Putative small protein.
  
     0.763
SEH65784.1
Hypothetical protein.
  
     0.760
Your Current Organism:
Rhizobium tibeticum
NCBI taxonomy Id: 501024
Other names: CCBAU 85039, CGMCC 1.7071, LMG 24453, LMG:24453, R. tibeticum, Rhizobium sp. CCBAU 85039, Rhizobium tibeticum Hou et al. 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.