STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tuaG_2Putative teichuronic acid biosynthesis glycosyltransferase TuaG. (333 aa)    
Predicted Functional Partners:
pglI_1
GalNAc(5)-diNAcBac-PP-undecaprenol beta-1,3-glucosyltransferase.
  
     0.762
lgrD_1
Linear gramicidin synthase subunit D.
  
 0.705
SEH74907.1
Putative glycosyl transferase.
 
  
 0.702
epsE_1
Putative glycosyltransferase EpsE.
  
     0.700
cpsD
Tyrosine-protein kinase CpsD.
 
  
 0.687
SEH75062.1
Lipid A core-O-antigen ligase.
 
  
 0.677
pgaC
Poly-beta-1,6-N-acetyl-D-glucosamine synthase.
 
  
 0.672
pglI_3
GalNAc(5)-diNAcBac-PP-undecaprenol beta-1,3-glucosyltransferase.
  
     0.664
SEH75048.1
Polysaccharide export protein Wza.
 
  
 0.637
exoK
Endo-1,3-1,4-beta-glycanase ExoK precursor.
 
   
 0.626
Your Current Organism:
Rhizobium tibeticum
NCBI taxonomy Id: 501024
Other names: CCBAU 85039, CGMCC 1.7071, LMG 24453, LMG:24453, R. tibeticum, Rhizobium sp. CCBAU 85039, Rhizobium tibeticum Hou et al. 2009
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