Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH74907.1 | SEH75048.1 | RTCCBAU85039_2123 | RTCCBAU85039_2131 | Putative glycosyl transferase. | Polysaccharide export protein Wza. | 0.623 |
SEH74907.1 | SEH75062.1 | RTCCBAU85039_2123 | RTCCBAU85039_2132 | Putative glycosyl transferase. | Lipid A core-O-antigen ligase. | 0.792 |
SEH74907.1 | cpsD | RTCCBAU85039_2123 | RTCCBAU85039_2121 | Putative glycosyl transferase. | Tyrosine-protein kinase CpsD. | 0.915 |
SEH74907.1 | exoK | RTCCBAU85039_2123 | RTCCBAU85039_2125 | Putative glycosyl transferase. | Endo-1,3-1,4-beta-glycanase ExoK precursor. | 0.875 |
SEH74907.1 | lgrD_1 | RTCCBAU85039_2123 | RTCCBAU85039_6649 | Putative glycosyl transferase. | Linear gramicidin synthase subunit D. | 0.530 |
SEH74907.1 | pgaC | RTCCBAU85039_2123 | RTCCBAU85039_2124 | Putative glycosyl transferase. | Poly-beta-1,6-N-acetyl-D-glucosamine synthase. | 0.952 |
SEH74907.1 | pglI_1 | RTCCBAU85039_2123 | RTCCBAU85039_2127 | Putative glycosyl transferase. | GalNAc(5)-diNAcBac-PP-undecaprenol beta-1,3-glucosyltransferase. | 0.562 |
SEH74907.1 | tuaG_2 | RTCCBAU85039_2123 | RTCCBAU85039_2128 | Putative glycosyl transferase. | Putative teichuronic acid biosynthesis glycosyltransferase TuaG. | 0.702 |
SEH75048.1 | SEH74907.1 | RTCCBAU85039_2131 | RTCCBAU85039_2123 | Polysaccharide export protein Wza. | Putative glycosyl transferase. | 0.623 |
SEH75048.1 | SEH75062.1 | RTCCBAU85039_2131 | RTCCBAU85039_2132 | Polysaccharide export protein Wza. | Lipid A core-O-antigen ligase. | 0.939 |
SEH75048.1 | cpsD | RTCCBAU85039_2131 | RTCCBAU85039_2121 | Polysaccharide export protein Wza. | Tyrosine-protein kinase CpsD. | 0.998 |
SEH75048.1 | exoK | RTCCBAU85039_2131 | RTCCBAU85039_2125 | Polysaccharide export protein Wza. | Endo-1,3-1,4-beta-glycanase ExoK precursor. | 0.733 |
SEH75048.1 | pgaC | RTCCBAU85039_2131 | RTCCBAU85039_2124 | Polysaccharide export protein Wza. | Poly-beta-1,6-N-acetyl-D-glucosamine synthase. | 0.865 |
SEH75048.1 | pglI_1 | RTCCBAU85039_2131 | RTCCBAU85039_2127 | Polysaccharide export protein Wza. | GalNAc(5)-diNAcBac-PP-undecaprenol beta-1,3-glucosyltransferase. | 0.542 |
SEH75048.1 | tuaG_2 | RTCCBAU85039_2131 | RTCCBAU85039_2128 | Polysaccharide export protein Wza. | Putative teichuronic acid biosynthesis glycosyltransferase TuaG. | 0.637 |
SEH75062.1 | SEH74907.1 | RTCCBAU85039_2132 | RTCCBAU85039_2123 | Lipid A core-O-antigen ligase. | Putative glycosyl transferase. | 0.792 |
SEH75062.1 | SEH75048.1 | RTCCBAU85039_2132 | RTCCBAU85039_2131 | Lipid A core-O-antigen ligase. | Polysaccharide export protein Wza. | 0.939 |
SEH75062.1 | cpsD | RTCCBAU85039_2132 | RTCCBAU85039_2121 | Lipid A core-O-antigen ligase. | Tyrosine-protein kinase CpsD. | 0.703 |
SEH75062.1 | exoK | RTCCBAU85039_2132 | RTCCBAU85039_2125 | Lipid A core-O-antigen ligase. | Endo-1,3-1,4-beta-glycanase ExoK precursor. | 0.755 |
SEH75062.1 | pgaC | RTCCBAU85039_2132 | RTCCBAU85039_2124 | Lipid A core-O-antigen ligase. | Poly-beta-1,6-N-acetyl-D-glucosamine synthase. | 0.777 |
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