Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH60147.1 | SEI08362.1 | RTCCBAU85039_1344 | RTCCBAU85039_4321 | Response regulator. | Blue-light-activated histidine kinase. | 0.981 |
SEH60147.1 | SEI14978.1 | RTCCBAU85039_1344 | RTCCBAU85039_5179 | Response regulator. | Blue-light-activated histidine kinase 1. | 0.971 |
SEH60147.1 | barA_3 | RTCCBAU85039_1344 | RTCCBAU85039_2769 | Response regulator. | Signal transduction histidine-protein kinase BarA. | 0.999 |
SEH60147.1 | cph1_1 | RTCCBAU85039_1344 | RTCCBAU85039_0799 | Response regulator. | Phytochrome-like protein cph1. | 0.949 |
SEH60147.1 | czcR | RTCCBAU85039_1344 | RTCCBAU85039_5436 | Response regulator. | Transcriptional activator protein CzcR. | 0.857 |
SEH60147.1 | fixL_1 | RTCCBAU85039_1344 | RTCCBAU85039_0803 | Response regulator. | Sensor protein FixL. | 0.949 |
SEH60147.1 | qseB_2 | RTCCBAU85039_1344 | RTCCBAU85039_2586 | Response regulator. | Transcriptional regulatory protein QseB. | 0.590 |
SEH60147.1 | qseC_2 | RTCCBAU85039_1344 | RTCCBAU85039_2587 | Response regulator. | Sensor protein QseC. | 0.977 |
SEH60147.1 | virA | RTCCBAU85039_1344 | RTCCBAU85039_6850 | Response regulator. | Wide host range VirA protein. | 0.993 |
SEI08362.1 | SEH60147.1 | RTCCBAU85039_4321 | RTCCBAU85039_1344 | Blue-light-activated histidine kinase. | Response regulator. | 0.981 |
SEI08362.1 | SEI14978.1 | RTCCBAU85039_4321 | RTCCBAU85039_5179 | Blue-light-activated histidine kinase. | Blue-light-activated histidine kinase 1. | 0.967 |
SEI08362.1 | barA_3 | RTCCBAU85039_4321 | RTCCBAU85039_2769 | Blue-light-activated histidine kinase. | Signal transduction histidine-protein kinase BarA. | 0.999 |
SEI08362.1 | cph1_1 | RTCCBAU85039_4321 | RTCCBAU85039_0799 | Blue-light-activated histidine kinase. | Phytochrome-like protein cph1. | 0.975 |
SEI08362.1 | czcR | RTCCBAU85039_4321 | RTCCBAU85039_5436 | Blue-light-activated histidine kinase. | Transcriptional activator protein CzcR. | 0.958 |
SEI08362.1 | fixL_1 | RTCCBAU85039_4321 | RTCCBAU85039_0803 | Blue-light-activated histidine kinase. | Sensor protein FixL. | 0.986 |
SEI08362.1 | qseB_2 | RTCCBAU85039_4321 | RTCCBAU85039_2586 | Blue-light-activated histidine kinase. | Transcriptional regulatory protein QseB. | 0.774 |
SEI08362.1 | qseC_2 | RTCCBAU85039_4321 | RTCCBAU85039_2587 | Blue-light-activated histidine kinase. | Sensor protein QseC. | 0.889 |
SEI08362.1 | virA | RTCCBAU85039_4321 | RTCCBAU85039_6850 | Blue-light-activated histidine kinase. | Wide host range VirA protein. | 0.996 |
SEI14978.1 | SEH60147.1 | RTCCBAU85039_5179 | RTCCBAU85039_1344 | Blue-light-activated histidine kinase 1. | Response regulator. | 0.971 |
SEI14978.1 | SEI08362.1 | RTCCBAU85039_5179 | RTCCBAU85039_4321 | Blue-light-activated histidine kinase 1. | Blue-light-activated histidine kinase. | 0.967 |
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