Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
abfA | bgaB | RTCCBAU85039_3746 | RTCCBAU85039_3537 | Intracellular exo-alpha-(1->5)-L-arabinofuranosidase. | Beta-galactosidase bgaB. | 0.736 |
abfA | lacZ | RTCCBAU85039_3746 | RTCCBAU85039_2600 | Intracellular exo-alpha-(1->5)-L-arabinofuranosidase. | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | 0.776 |
abfA | melA_1 | RTCCBAU85039_3746 | RTCCBAU85039_3748 | Intracellular exo-alpha-(1->5)-L-arabinofuranosidase. | Alpha-galactosidase. | 0.817 |
abfA | melA_2 | RTCCBAU85039_3746 | RTCCBAU85039_3753 | Intracellular exo-alpha-(1->5)-L-arabinofuranosidase. | Alpha-galactosidase. | 0.823 |
abfA | uxaC | RTCCBAU85039_3746 | RTCCBAU85039_2371 | Intracellular exo-alpha-(1->5)-L-arabinofuranosidase. | Uronate isomerase. | 0.731 |
abfA | xynB | RTCCBAU85039_3746 | RTCCBAU85039_3277 | Intracellular exo-alpha-(1->5)-L-arabinofuranosidase. | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.909 |
bgaB | abfA | RTCCBAU85039_3537 | RTCCBAU85039_3746 | Beta-galactosidase bgaB. | Intracellular exo-alpha-(1->5)-L-arabinofuranosidase. | 0.736 |
bgaB | lacZ | RTCCBAU85039_3537 | RTCCBAU85039_2600 | Beta-galactosidase bgaB. | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | 0.812 |
bgaB | melA_1 | RTCCBAU85039_3537 | RTCCBAU85039_3748 | Beta-galactosidase bgaB. | Alpha-galactosidase. | 0.823 |
bgaB | melA_2 | RTCCBAU85039_3537 | RTCCBAU85039_3753 | Beta-galactosidase bgaB. | Alpha-galactosidase. | 0.839 |
bgaB | mro | RTCCBAU85039_3537 | RTCCBAU85039_0255 | Beta-galactosidase bgaB. | Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer. | 0.758 |
bgaB | xylA | RTCCBAU85039_3537 | RTCCBAU85039_2537 | Beta-galactosidase bgaB. | Xylose isomerase; Belongs to the xylose isomerase family. | 0.711 |
bgaB | xynB | RTCCBAU85039_3537 | RTCCBAU85039_3277 | Beta-galactosidase bgaB. | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.571 |
glk | lacZ | RTCCBAU85039_1183 | RTCCBAU85039_2600 | Glucokinase; Belongs to the bacterial glucokinase family. | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | 0.692 |
glk | mro | RTCCBAU85039_1183 | RTCCBAU85039_0255 | Glucokinase; Belongs to the bacterial glucokinase family. | Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer. | 0.726 |
glk | xylA | RTCCBAU85039_1183 | RTCCBAU85039_2537 | Glucokinase; Belongs to the bacterial glucokinase family. | Xylose isomerase; Belongs to the xylose isomerase family. | 0.718 |
gno_1 | lacZ | RTCCBAU85039_0595 | RTCCBAU85039_2600 | Gluconate 5-dehydrogenase. | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | 0.754 |
gno_1 | uxaC | RTCCBAU85039_0595 | RTCCBAU85039_2371 | Gluconate 5-dehydrogenase. | Uronate isomerase. | 0.403 |
lacZ | abfA | RTCCBAU85039_2600 | RTCCBAU85039_3746 | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | Intracellular exo-alpha-(1->5)-L-arabinofuranosidase. | 0.776 |
lacZ | bgaB | RTCCBAU85039_2600 | RTCCBAU85039_3537 | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | Beta-galactosidase bgaB. | 0.812 |
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