STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exsH_2Endo-1,3-1,4-beta-glycanase ExsH. (309 aa)    
Predicted Functional Partners:
SEH51593.1
Hypothetical protein.
    
  0.673
pglJ
N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase.
       0.661
SEI13899.1
Thiol-disulfide oxidoreductase.
  
     0.661
ywqF_2
UDP-glucose 6-dehydrogenase YwqF.
       0.628
SEI00521.1
Lipid A core-O-antigen ligase.
 
     0.548
SEH55076.1
NADP oxidoreductase coenzyme F420-dependent.
  
     0.527
SEI18128.1
Putative endoglucanase.
    
 0.525
SEI15497.1
Putative ABC transporter-binding protein precursor.
  
     0.521
SEI07300.1
Hypothetical protein.
  
     0.503
nagZ
Beta-hexosaminidase.
  
 
 0.465
Your Current Organism:
Rhizobium tibeticum
NCBI taxonomy Id: 501024
Other names: CCBAU 85039, CGMCC 1.7071, LMG 24453, LMG:24453, R. tibeticum, Rhizobium sp. CCBAU 85039, Rhizobium tibeticum Hou et al. 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.