STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI09263.1Hypothetical protein. (91 aa)    
Predicted Functional Partners:
SEI09270.1
Hypothetical protein.
       0.773
SEI12105.1
Hypothetical protein.
  
     0.767
SEI10400.1
Hypothetical protein.
 
     0.529
SEI17360.1
Antibiotic biosynthesis monooxygenase.
  
     0.501
SEI20584.1
Recombinase.
  
     0.478
SEH58220.1
Hypothetical protein.
  
     0.430
SEH54523.1
Hypothetical protein.
  
     0.427
badR
Benzoate anaerobic degradation regulator.
  
     0.422
bjaI
Isovaleryl-homoserine lactone synthase; Belongs to the autoinducer synthase family.
  
     0.412
Your Current Organism:
Rhizobium tibeticum
NCBI taxonomy Id: 501024
Other names: CCBAU 85039, CGMCC 1.7071, LMG 24453, LMG:24453, R. tibeticum, Rhizobium sp. CCBAU 85039, Rhizobium tibeticum Hou et al. 2009
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.