STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI10935.1MFS transporter, aromatic acid:H+ symporter (AAHS) family. (466 aa)    
Predicted Functional Partners:
SEI16196.1
Putative diguanylate cyclase.
  
     0.746
msmE_1
Multiple sugar-binding protein precursor.
  
     0.700
lgrD_1
Linear gramicidin synthase subunit D.
    
 0.682
SEI16941.1
Acetyltransferase (GNAT) family protein.
  
     0.677
SEI20543.1
Hypothetical protein.
  
     0.660
SEI13395.1
Acyltransferase family protein.
  
     0.638
SEH84850.1
Hypothetical protein.
  
     0.623
SEI17360.1
Antibiotic biosynthesis monooxygenase.
  
     0.614
SEH99294.1
Hypothetical protein.
  
     0.588
cfaD
Colonization factor antigen I subunit D.
  
     0.578
Your Current Organism:
Rhizobium tibeticum
NCBI taxonomy Id: 501024
Other names: CCBAU 85039, CGMCC 1.7071, LMG 24453, LMG:24453, R. tibeticum, Rhizobium sp. CCBAU 85039, Rhizobium tibeticum Hou et al. 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.