Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI12027.1 | mdtA_4 | RTCCBAU85039_4743 | RTCCBAU85039_4740 | Hypothetical protein. | Multidrug transporter MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.451 |
SEI12027.1 | mdtC_2 | RTCCBAU85039_4743 | RTCCBAU85039_4741 | Hypothetical protein. | Multidrug transporter MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.661 |
SEI12027.1 | oxdD | RTCCBAU85039_4743 | RTCCBAU85039_4742 | Hypothetical protein. | Oxalate decarboxylase OxdD. | 0.773 |
mdtA_4 | SEI12027.1 | RTCCBAU85039_4740 | RTCCBAU85039_4743 | Multidrug transporter MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Hypothetical protein. | 0.451 |
mdtA_4 | mdtC_2 | RTCCBAU85039_4740 | RTCCBAU85039_4741 | Multidrug transporter MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Multidrug transporter MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.937 |
mdtA_4 | oxdD | RTCCBAU85039_4740 | RTCCBAU85039_4742 | Multidrug transporter MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Oxalate decarboxylase OxdD. | 0.451 |
mdtC_2 | SEI12027.1 | RTCCBAU85039_4741 | RTCCBAU85039_4743 | Multidrug transporter MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Hypothetical protein. | 0.661 |
mdtC_2 | mdtA_4 | RTCCBAU85039_4741 | RTCCBAU85039_4740 | Multidrug transporter MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Multidrug transporter MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.937 |
mdtC_2 | oxdD | RTCCBAU85039_4741 | RTCCBAU85039_4742 | Multidrug transporter MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Oxalate decarboxylase OxdD. | 0.661 |
oxdD | SEI12027.1 | RTCCBAU85039_4742 | RTCCBAU85039_4743 | Oxalate decarboxylase OxdD. | Hypothetical protein. | 0.773 |
oxdD | mdtA_4 | RTCCBAU85039_4742 | RTCCBAU85039_4740 | Oxalate decarboxylase OxdD. | Multidrug transporter MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.451 |
oxdD | mdtC_2 | RTCCBAU85039_4742 | RTCCBAU85039_4741 | Oxalate decarboxylase OxdD. | Multidrug transporter MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.661 |