STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI14214.1Hypothetical protein. (321 aa)    
Predicted Functional Partners:
SEI19412.1
Transposase DDE domain protein.
  
     0.759
SEI22628.1
Hypothetical protein.
  
     0.753
ptlE
Pertussis toxin liberation protein E.
  
     0.748
SEI02438.1
Hypothetical protein.
  
     0.742
virB1_2
Type IV secretion system protein virB1.
  
     0.695
SEH37762.1
Hypothetical protein.
  
     0.692
SEH84867.1
Cyclic 3',5'-adenosine monophosphate phosphodiesterase.
  
     0.688
hlyD_3
Hemolysin secretion protein D, chromosomal.
  
     0.688
ddl
D-alanine-D-alanine ligase.
  
     0.674
SEI22103.1
Hypothetical protein.
  
     0.667
Your Current Organism:
Rhizobium tibeticum
NCBI taxonomy Id: 501024
Other names: CCBAU 85039, CGMCC 1.7071, LMG 24453, LMG:24453, R. tibeticum, Rhizobium sp. CCBAU 85039, Rhizobium tibeticum Hou et al. 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.