STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI15185.1Hypothetical protein. (130 aa)    
Predicted Functional Partners:
hpaH
Anthranilate 3-monooxygenase oxygenase component.
 
  
  0.956
C1-hpah_1
P-hydroxyphenylacetate 3-hydroxylase, reductase component.
 
     0.789
SEI15189.1
Hypothetical protein.
       0.578
lgrD_1
Linear gramicidin synthase subunit D.
     
 0.509
ydfH_7
Putative HTH-type transcriptional regulator YdfH.
       0.495
puuR_2
HTH-type transcriptional regulator PuuR.
  
  0.492
Your Current Organism:
Rhizobium tibeticum
NCBI taxonomy Id: 501024
Other names: CCBAU 85039, CGMCC 1.7071, LMG 24453, LMG:24453, R. tibeticum, Rhizobium sp. CCBAU 85039, Rhizobium tibeticum Hou et al. 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.