STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hipASerine/threonine-protein kinase HipA. (428 aa)    
Predicted Functional Partners:
SEI15013.1
Putative transcriptional regulator.
 
 
 
 0.967
SEH50630.1
Transcriptional regulator, y4mF family.
   
 
 0.959
SEI17388.1
Transcriptional regulator, y4mF family.
       0.791
SEH55094.1
Putative protein related to capsule biosynthesis enzymes.
  
     0.709
SEH69250.1
Anaerobic benzoate catabolism transcriptional regulator.
  
   0.620
SEI17397.1
Small integral membrane protein.
       0.458
SEI21984.1
Hypothetical protein.
  
     0.408
Your Current Organism:
Rhizobium tibeticum
NCBI taxonomy Id: 501024
Other names: CCBAU 85039, CGMCC 1.7071, LMG 24453, LMG:24453, R. tibeticum, Rhizobium sp. CCBAU 85039, Rhizobium tibeticum Hou et al. 2009
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.