Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH86564.1 | SEH87305.1 | RTCCBAU85039_2768 | RTCCBAU85039_2817 | Blue-light-activated protein. | Blue-light-activated histidine kinase. | 0.998 |
SEH86564.1 | barA_2 | RTCCBAU85039_2768 | RTCCBAU85039_1767 | Blue-light-activated protein. | Signal transduction histidine-protein kinase BarA. | 0.999 |
SEH86564.1 | barA_3 | RTCCBAU85039_2768 | RTCCBAU85039_2769 | Blue-light-activated protein. | Signal transduction histidine-protein kinase BarA. | 0.999 |
SEH86564.1 | tcyJ | RTCCBAU85039_2768 | RTCCBAU85039_5650 | Blue-light-activated protein. | L-cystine-binding protein TcyJ precursor. | 0.693 |
SEH86564.1 | virA | RTCCBAU85039_2768 | RTCCBAU85039_6850 | Blue-light-activated protein. | Wide host range VirA protein. | 0.999 |
SEH87305.1 | SEH86564.1 | RTCCBAU85039_2817 | RTCCBAU85039_2768 | Blue-light-activated histidine kinase. | Blue-light-activated protein. | 0.998 |
SEH87305.1 | barA_2 | RTCCBAU85039_2817 | RTCCBAU85039_1767 | Blue-light-activated histidine kinase. | Signal transduction histidine-protein kinase BarA. | 0.998 |
SEH87305.1 | barA_3 | RTCCBAU85039_2817 | RTCCBAU85039_2769 | Blue-light-activated histidine kinase. | Signal transduction histidine-protein kinase BarA. | 0.999 |
SEH87305.1 | tcyJ | RTCCBAU85039_2817 | RTCCBAU85039_5650 | Blue-light-activated histidine kinase. | L-cystine-binding protein TcyJ precursor. | 0.738 |
SEH87305.1 | virA | RTCCBAU85039_2817 | RTCCBAU85039_6850 | Blue-light-activated histidine kinase. | Wide host range VirA protein. | 0.992 |
SEI17544.1 | cynR_5 | RTCCBAU85039_5648 | RTCCBAU85039_5647 | Putative glutamate synthase subunit beta. | Cyn operon transcriptional activator; Belongs to the LysR transcriptional regulatory family. | 0.896 |
SEI17544.1 | tcyJ | RTCCBAU85039_5648 | RTCCBAU85039_5650 | Putative glutamate synthase subunit beta. | L-cystine-binding protein TcyJ precursor. | 0.732 |
SEI17544.1 | tcyN | RTCCBAU85039_5648 | RTCCBAU85039_5649 | Putative glutamate synthase subunit beta. | L-cystine import ATP-binding protein TcyN. | 0.773 |
SEI17544.1 | yxeN_3 | RTCCBAU85039_5648 | RTCCBAU85039_5651 | Putative glutamate synthase subunit beta. | Putative amino-acid permease protein YxeN. | 0.584 |
SEI17544.1 | yxeN_4 | RTCCBAU85039_5648 | RTCCBAU85039_5652 | Putative glutamate synthase subunit beta. | Putative amino-acid permease protein YxeN. | 0.542 |
barA_2 | SEH86564.1 | RTCCBAU85039_1767 | RTCCBAU85039_2768 | Signal transduction histidine-protein kinase BarA. | Blue-light-activated protein. | 0.999 |
barA_2 | SEH87305.1 | RTCCBAU85039_1767 | RTCCBAU85039_2817 | Signal transduction histidine-protein kinase BarA. | Blue-light-activated histidine kinase. | 0.998 |
barA_2 | barA_3 | RTCCBAU85039_1767 | RTCCBAU85039_2769 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.999 |
barA_2 | tcyJ | RTCCBAU85039_1767 | RTCCBAU85039_5650 | Signal transduction histidine-protein kinase BarA. | L-cystine-binding protein TcyJ precursor. | 0.693 |
barA_2 | virA | RTCCBAU85039_1767 | RTCCBAU85039_6850 | Signal transduction histidine-protein kinase BarA. | Wide host range VirA protein. | 0.999 |
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