STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsC_12Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (373 aa)    
Predicted Functional Partners:
rbsA_13
Ribose import ATP-binding protein RbsA.
  0.968
lsrB_2
Autoinducer 2-binding protein LsrB precursor.
 
  0.930
mglA_7
Galactose/methyl galactoside import ATP-binding protein MglA.
 
  0.852
iolC_2
5-dehydro-2-deoxygluconokinase.
 
    0.844
SEI01035.1
D-allose transporter subunit.
  
  0.828
iolB_2
5-deoxy-glucuronate isomerase.
 
    0.798
rbsA_2
Ribose import ATP-binding protein RbsA.
 
  0.787
iolD_2
3D-(3,5/4)-trihydroxycyclohexane-1, 2-dionehydrolase; Belongs to the TPP enzyme family.
 
    0.784
rbsB_2
D-ribose-binding periplasmic protein precursor.
  
  0.771
iolE_5
Inosose dehydratase.
 
    0.747
Your Current Organism:
Rhizobium tibeticum
NCBI taxonomy Id: 501024
Other names: CCBAU 85039, CGMCC 1.7071, LMG 24453, LMG:24453, R. tibeticum, Rhizobium sp. CCBAU 85039, Rhizobium tibeticum Hou et al. 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.