Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
csiR_1 | csiR_2 | RTCCBAU85039_2788 | RTCCBAU85039_2789 | Carbon starvation induced regulator. | Carbon starvation induced regulator. | 0.636 |
csiR_1 | lldR | RTCCBAU85039_2788 | RTCCBAU85039_2692 | Carbon starvation induced regulator. | Putative L-lactate dehydrogenase operon regulatory protein. | 0.457 |
csiR_1 | lutR_5 | RTCCBAU85039_2788 | RTCCBAU85039_4697 | Carbon starvation induced regulator. | L-lactate utilization operon repressor. | 0.481 |
csiR_1 | pdhR_2 | RTCCBAU85039_2788 | RTCCBAU85039_3003 | Carbon starvation induced regulator. | Pyruvate dehydrogenase complex repressor. | 0.485 |
csiR_1 | ydfH_10 | RTCCBAU85039_2788 | RTCCBAU85039_6451 | Carbon starvation induced regulator. | Putative HTH-type transcriptional regulator YdfH. | 0.710 |
csiR_1 | ydfH_11 | RTCCBAU85039_2788 | RTCCBAU85039_6685 | Carbon starvation induced regulator. | Putative HTH-type transcriptional regulator YdfH. | 0.698 |
csiR_1 | ydfH_2 | RTCCBAU85039_2788 | RTCCBAU85039_2710 | Carbon starvation induced regulator. | Putative HTH-type transcriptional regulator YdfH. | 0.721 |
csiR_1 | ydfH_7 | RTCCBAU85039_2788 | RTCCBAU85039_5212 | Carbon starvation induced regulator. | Putative HTH-type transcriptional regulator YdfH. | 0.733 |
csiR_2 | csiR_1 | RTCCBAU85039_2789 | RTCCBAU85039_2788 | Carbon starvation induced regulator. | Carbon starvation induced regulator. | 0.636 |
csiR_2 | lldR | RTCCBAU85039_2789 | RTCCBAU85039_2692 | Carbon starvation induced regulator. | Putative L-lactate dehydrogenase operon regulatory protein. | 0.548 |
csiR_2 | lutR_3 | RTCCBAU85039_2789 | RTCCBAU85039_2047 | Carbon starvation induced regulator. | L-lactate utilization operon repressor. | 0.421 |
csiR_2 | lutR_5 | RTCCBAU85039_2789 | RTCCBAU85039_4697 | Carbon starvation induced regulator. | L-lactate utilization operon repressor. | 0.552 |
csiR_2 | pdhR_2 | RTCCBAU85039_2789 | RTCCBAU85039_3003 | Carbon starvation induced regulator. | Pyruvate dehydrogenase complex repressor. | 0.575 |
csiR_2 | ydfH_10 | RTCCBAU85039_2789 | RTCCBAU85039_6451 | Carbon starvation induced regulator. | Putative HTH-type transcriptional regulator YdfH. | 0.737 |
csiR_2 | ydfH_11 | RTCCBAU85039_2789 | RTCCBAU85039_6685 | Carbon starvation induced regulator. | Putative HTH-type transcriptional regulator YdfH. | 0.727 |
csiR_2 | ydfH_2 | RTCCBAU85039_2789 | RTCCBAU85039_2710 | Carbon starvation induced regulator. | Putative HTH-type transcriptional regulator YdfH. | 0.744 |
csiR_2 | ydfH_7 | RTCCBAU85039_2789 | RTCCBAU85039_5212 | Carbon starvation induced regulator. | Putative HTH-type transcriptional regulator YdfH. | 0.753 |
csiR_3 | lldR | RTCCBAU85039_4643 | RTCCBAU85039_2692 | Carbon starvation induced regulator. | Putative L-lactate dehydrogenase operon regulatory protein. | 0.634 |
csiR_3 | lutR_3 | RTCCBAU85039_4643 | RTCCBAU85039_2047 | Carbon starvation induced regulator. | L-lactate utilization operon repressor. | 0.477 |
csiR_3 | lutR_5 | RTCCBAU85039_4643 | RTCCBAU85039_4697 | Carbon starvation induced regulator. | L-lactate utilization operon repressor. | 0.606 |
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