STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI21096.1transposase/IS protein. (135 aa)    
Predicted Functional Partners:
dnaC_1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 
 0.957
SEI21099.1
Transposase.
 
    0.947
SEI21091.1
Transposase.
     0.946
SEI21993.1
Transposase.
 
    0.776
SEH91804.1
Transposase.
 
     0.762
SEI18695.1
Replicative DNA helicase.
  
 
 0.697
SEI21866.1
Transposase.
  
     0.628
dnaC_2
DNA replication protein DnaC.
 
     0.626
SEI15448.1
Transposase.
  
     0.480
Your Current Organism:
Rhizobium tibeticum
NCBI taxonomy Id: 501024
Other names: CCBAU 85039, CGMCC 1.7071, LMG 24453, LMG:24453, R. tibeticum, Rhizobium sp. CCBAU 85039, Rhizobium tibeticum Hou et al. 2009
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