STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B5F15_02770Unannotated protein; Belongs to the aspartokinase family. (402 aa)    
Predicted Functional Partners:
B5F15_01105
Unannotated protein; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 
 0.990
B5F15_02780
Unannotated protein.
 0.975
B5F15_09940
Unannotated protein.
   
 0.967
B5F15_05785
Unannotated protein.
  
 
 0.951
thrB
Unannotated protein; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
 
 0.946
dapF
Unannotated protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
 
 
 0.915
B5F15_05780
Unannotated protein.
  
 
 0.888
dapA
Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
 
 
 0.867
B5F15_08905
Unannotated protein.
  
 
 0.864
B5F15_03815
Unannotated protein.
  
 
 0.858
Your Current Organism:
Butyricicoccus pullicaecorum
NCBI taxonomy Id: 501571
Other names: B. pullicaecorum, Butyricicoccus pullicaecorum Eeckhaut et al. 2008, CCUG 55265, Clostridiaceae bacterium 25-3, DSM 23266, LMG 24109, LMG:24109, strain 25-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.