STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900143195_00589Unannotated protein. (383 aa)    
Predicted Functional Partners:
B5F15_00710
Unannotated protein.
 
 0.913
B5F15_04430
Unannotated protein; Belongs to the SEDS family.
   
 
 0.869
GCA_900143195_03150
Unannotated protein.
   
 0.863
GCA_900143195_01380
Unannotated protein.
 
 0.811
ribBA
Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.789
B5F15_07915
Unannotated protein; Belongs to the pyruvate kinase family.
  
 
  0.773
GCA_900143195_01385
Unannotated protein.
   
 
 0.720
GCA_900143195_00588
Unannotated protein.
 
     0.656
B5F15_13545
Unannotated protein.
  
 
 0.609
B5F15_02395
Unannotated protein.
  
  
 0.548
Your Current Organism:
Butyricicoccus pullicaecorum
NCBI taxonomy Id: 501571
Other names: B. pullicaecorum, Butyricicoccus pullicaecorum Eeckhaut et al. 2008, CCUG 55265, Clostridiaceae bacterium 25-3, DSM 23266, LMG 24109, LMG:24109, strain 25-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.