STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B5F15_08405Unannotated protein. (584 aa)    
Predicted Functional Partners:
B5F15_08400
Unannotated protein.
 
     0.911
B5F15_08420
Unannotated protein.
 
     0.828
B5F15_08435
Unannotated protein.
 
  
 0.788
GCA_900143195_01268
Unannotated protein.
 
  
 0.787
B5F15_16355
Unannotated protein.
 
  
 0.787
B5F15_08425
Unannotated protein.
 
     0.755
B5F15_16345
Unannotated protein.
 
     0.718
B5F15_16595
Unannotated protein.
 
     0.717
GCA_900143195_00668
Unannotated protein.
 
     0.700
GCA_900143195_00552
Unannotated protein.
 
     0.699
Your Current Organism:
Butyricicoccus pullicaecorum
NCBI taxonomy Id: 501571
Other names: B. pullicaecorum, Butyricicoccus pullicaecorum Eeckhaut et al. 2008, CCUG 55265, Clostridiaceae bacterium 25-3, DSM 23266, LMG 24109, LMG:24109, strain 25-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.