STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B5F15_13235Unannotated protein. (454 aa)    
Predicted Functional Partners:
pyrB
Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
 0.999
carA
Unannotated protein; Belongs to the CarA family.
  
 0.982
carB
Unannotated protein; Belongs to the CarB family.
 
 0.975
B5F15_13240
Unannotated protein.
 
  
 0.929
pyrD
Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate.
  
 0.922
B5F15_13230
Unannotated protein.
 
  
 0.911
pyrR
Unannotated protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.
  
 
 0.895
pyrK
Unannotated protein; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
  
 
 0.856
B5F15_13245
Unannotated protein.
  
  
 0.812
rnfB
Unannotated protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
    
  0.808
Your Current Organism:
Butyricicoccus pullicaecorum
NCBI taxonomy Id: 501571
Other names: B. pullicaecorum, Butyricicoccus pullicaecorum Eeckhaut et al. 2008, CCUG 55265, Clostridiaceae bacterium 25-3, DSM 23266, LMG 24109, LMG:24109, strain 25-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.