Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B5F15_00645 | B5F15_02005 | GCA_900143195_02156 | GCA_900143195_01557 | Unannotated protein. | Unannotated protein; Belongs to the ClpA/ClpB family. | 0.804 |
B5F15_00645 | B5F15_04005 | GCA_900143195_02156 | GCA_900143195_01640 | Unannotated protein. | Unannotated protein; Belongs to the ClpA/ClpB family. | 0.804 |
B5F15_00645 | B5F15_14935 | GCA_900143195_02156 | GCA_900143195_00046 | Unannotated protein. | Unannotated protein. | 0.925 |
B5F15_00645 | GCA_900143195_01418 | GCA_900143195_02156 | GCA_900143195_01418 | Unannotated protein. | Unannotated protein. | 0.858 |
B5F15_00645 | dnaK | GCA_900143195_02156 | GCA_900143195_00953 | Unannotated protein. | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.998 |
B5F15_00645 | groL | GCA_900143195_02156 | GCA_900143195_02068 | Unannotated protein. | Unannotated protein; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.855 |
B5F15_00645 | grpE | GCA_900143195_02156 | GCA_900143195_00954 | Unannotated protein. | Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depe [...] | 0.954 |
B5F15_00645 | hrcA | GCA_900143195_02156 | GCA_900143195_00955 | Unannotated protein. | Unannotated protein; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.776 |
B5F15_00645 | htpG | GCA_900143195_02156 | GCA_900143195_02229 | Unannotated protein. | Unannotated protein; Molecular chaperone. Has ATPase activity. | 0.995 |
B5F15_02005 | B5F15_00645 | GCA_900143195_01557 | GCA_900143195_02156 | Unannotated protein; Belongs to the ClpA/ClpB family. | Unannotated protein. | 0.804 |
B5F15_02005 | dnaJ | GCA_900143195_01557 | GCA_900143195_00952 | Unannotated protein; Belongs to the ClpA/ClpB family. | Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK [...] | 0.804 |
B5F15_02005 | dnaK | GCA_900143195_01557 | GCA_900143195_00953 | Unannotated protein; Belongs to the ClpA/ClpB family. | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.980 |
B5F15_02005 | groL | GCA_900143195_01557 | GCA_900143195_02068 | Unannotated protein; Belongs to the ClpA/ClpB family. | Unannotated protein; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.654 |
B5F15_02005 | grpE | GCA_900143195_01557 | GCA_900143195_00954 | Unannotated protein; Belongs to the ClpA/ClpB family. | Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depe [...] | 0.848 |
B5F15_02005 | hrcA | GCA_900143195_01557 | GCA_900143195_00955 | Unannotated protein; Belongs to the ClpA/ClpB family. | Unannotated protein; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.655 |
B5F15_02005 | htpG | GCA_900143195_01557 | GCA_900143195_02229 | Unannotated protein; Belongs to the ClpA/ClpB family. | Unannotated protein; Molecular chaperone. Has ATPase activity. | 0.751 |
B5F15_04005 | B5F15_00645 | GCA_900143195_01640 | GCA_900143195_02156 | Unannotated protein; Belongs to the ClpA/ClpB family. | Unannotated protein. | 0.804 |
B5F15_04005 | dnaJ | GCA_900143195_01640 | GCA_900143195_00952 | Unannotated protein; Belongs to the ClpA/ClpB family. | Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK [...] | 0.829 |
B5F15_04005 | dnaK | GCA_900143195_01640 | GCA_900143195_00953 | Unannotated protein; Belongs to the ClpA/ClpB family. | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.989 |
B5F15_04005 | groL | GCA_900143195_01640 | GCA_900143195_02068 | Unannotated protein; Belongs to the ClpA/ClpB family. | Unannotated protein; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.777 |
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