STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900143195_02624Unannotated protein. (242 aa)    
Predicted Functional Partners:
GCA_900143195_02623
Unannotated protein.
  
    0.781
B5F15_09405
Unannotated protein.
       0.774
B5F15_09400
Unannotated protein.
       0.773
GCA_900143195_02625
Unannotated protein.
       0.773
GCA_900143195_02925
Unannotated protein.
  
     0.607
GCA_900143195_01280
Unannotated protein.
  
     0.535
GCA_900143195_01285
Unannotated protein.
  
     0.492
GCA_900143195_02017
Unannotated protein.
 
    0.470
B5F15_09385
Unannotated protein.
       0.420
Your Current Organism:
Butyricicoccus pullicaecorum
NCBI taxonomy Id: 501571
Other names: B. pullicaecorum, Butyricicoccus pullicaecorum Eeckhaut et al. 2008, CCUG 55265, Clostridiaceae bacterium 25-3, DSM 23266, LMG 24109, LMG:24109, strain 25-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.