STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B5F15_05120Unannotated protein. (256 aa)    
Predicted Functional Partners:
mgsA
Unannotated protein; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
 
  
 0.763
B5F15_03035
Unannotated protein.
  
  
 0.758
dapB
Unannotated protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
  
    0.552
B5F15_02490
Unannotated protein.
  
 
 0.490
B5F15_02930
Unannotated protein.
     
 0.457
B5F15_02945
Unannotated protein.
    
 0.450
B5F15_05090
Unannotated protein.
 
     0.427
B5F15_05085
Unannotated protein.
 
     0.417
pgi
Unannotated protein; Belongs to the GPI family.
     
 0.415
B5F15_08575
Unannotated protein.
  
 
 0.412
Your Current Organism:
Butyricicoccus pullicaecorum
NCBI taxonomy Id: 501571
Other names: B. pullicaecorum, Butyricicoccus pullicaecorum Eeckhaut et al. 2008, CCUG 55265, Clostridiaceae bacterium 25-3, DSM 23266, LMG 24109, LMG:24109, strain 25-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.