STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B5F15_13530Unannotated protein. (400 aa)    
Predicted Functional Partners:
B5F15_13545
Unannotated protein.
 
 0.957
GCA_900143195_03150
Unannotated protein.
  
 0.901
B5F15_13535
Unannotated protein.
 
    
0.861
B5F15_05070
Unannotated protein.
 
 
 0.860
B5F15_14450
Unannotated protein.
 
 
 0.834
guaA
Unannotated protein; Catalyzes the synthesis of GMP from XMP.
    
  0.720
ribBA
Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 0.718
B5F15_05105
Unannotated protein.
 
   
 0.634
B5F15_05080
Unannotated protein.
  
   
 0.632
spoIIAB
Unannotated protein; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
   
 
 0.506
Your Current Organism:
Butyricicoccus pullicaecorum
NCBI taxonomy Id: 501571
Other names: B. pullicaecorum, Butyricicoccus pullicaecorum Eeckhaut et al. 2008, CCUG 55265, Clostridiaceae bacterium 25-3, DSM 23266, LMG 24109, LMG:24109, strain 25-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.