STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZB72639.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0276 family. (292 aa)    
Predicted Functional Partners:
KZB72640.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
AUQ43_00710
Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.985
KZB72641.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.979
KZB71416.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.698
KZB71758.1
Carbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.668
KZB71829.1
Metal-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.668
KZB73470.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.656
KZB73064.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.644
msrQ
Sulfoxide reductase heme-binding subunit YedZ; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalyti [...]
 
  
 0.632
KZB72346.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.619
Your Current Organism:
Thalassospira sp. MCCC1A01148
NCBI taxonomy Id: 501834
Other names: T. sp. MCCC 1A01148, Thalassospira sp. MCCC 1A01148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.