STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZB72153.1Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)    
Predicted Functional Partners:
KZB73534.1
Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.880
KZB71388.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.614
KZB69688.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.614
KZB71930.1
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.495
KZB72154.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.464
KZB71956.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.464
KZB70191.1
Dipeptide epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.444
KZB72156.1
feruloyl-CoA synthase; Catalyzes the conversion of ferulic acid to feruloyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.424
Your Current Organism:
Thalassospira sp. MCCC1A01148
NCBI taxonomy Id: 501834
Other names: T. sp. MCCC 1A01148, Thalassospira sp. MCCC 1A01148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.