STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZB69602.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)    
Predicted Functional Partners:
KZB73612.1
GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.568
KZB71300.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.520
KZB69601.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.515
KZB69603.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
    0.503
KZB70346.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.483
KZB70531.1
Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.480
KZB72983.1
Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.473
KZB71216.1
Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.473
KZB71781.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.465
KZB71198.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.452
Your Current Organism:
Thalassospira sp. MCCC1A01148
NCBI taxonomy Id: 501834
Other names: T. sp. MCCC 1A01148, Thalassospira sp. MCCC 1A01148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.