STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZB73316.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (244 aa)    
Predicted Functional Partners:
KZB73317.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.813
KZB70963.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.701
KZB71253.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.701
KZB71817.1
Nitroreductase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.679
KZB73294.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.619
KZB69564.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.588
KZB72141.1
Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.583
KZB71484.1
Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.583
KZB73350.1
Threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde.
    
  0.525
KZB73351.1
Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.525
Your Current Organism:
Thalassospira sp. MCCC1A01148
NCBI taxonomy Id: 501834
Other names: T. sp. MCCC 1A01148, Thalassospira sp. MCCC 1A01148
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