STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_0081KEGG: mxa:MXAN_1025 capsular exopolysaccharide family protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; ATPase-like, ParA/MinD. (766 aa)    
Predicted Functional Partners:
Hoch_6499
PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: mxa:MXAN_1915 polysaccharide biosynthesis/export protein.
 
 
 0.992
Hoch_0211
PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: scl:sce0873 outer membrane polysaccharide exporter.
 
 
 0.987
Hoch_5952
PFAM: polysaccharide export protein; KEGG: tgr:Tgr7_1307 polysaccharide export protein.
  
 
 0.974
Hoch_0082
PFAM: polysaccharide biosynthesis protein CapD; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: ank:AnaeK_4411 polysaccharide biosynthesis protein CapD.
 
  
 0.966
Hoch_0210
PFAM: sugar transferase; KEGG: scl:sce0882 glycosyltransferase.
 
  
 0.939
Hoch_5256
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: avn:Avin_30050 bacterial sugar transferase family protein.
 
  
 0.939
Hoch_3447
PFAM: PHP domain protein; KEGG: scl:sce5955 protein-tyrosine-phosphatase.
 
  
 0.880
Hoch_6500
PFAM: O-antigen polymerase; KEGG: mxa:MXAN_1052 O-antigen polymerase family protein.
 
   
 0.649
Hoch_2264
PFAM: glycosyl transferase family 2; KEGG: noc:Noc_2168 glycosyl transferase family protein.
 
  
 0.616
Hoch_3839
PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: scl:sce0874 oligosaccharyltransferase.
 
  
 0.612
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.